rs4789470 chr17:77607021 G>A
- Sequence
attcatatattcacttattcatcc[G/A]tattcatccaacctttgtttagca
- ASB in cell types
- bipolar neuron GM02255 (Lymphoblastoid Cell Lines) IPSC-derived bipolar neuron GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.40 | -0.55 | 2.12 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP autism, hdl cholesterol, paternal transmission distortion, stabilized warfarin dose, variant creutzfeldt-jakob disease