rs4790397 chr17:2975600 A>G
- Sequence
tggtgtaacacccgggctctcttc[A/G]ccctccctgatgggcgtgtttggg
- ASB in cell types
- BEAS-2B (bronchial epithelium) EA.hy 926 (human umbilical vein endothelial cell line) breast tumor
- ASB for transcription factors
- GCR_HUMAN HIF1A_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 3.16 | n/a | 1.50 | n/a | No Hit | |||
| HIF1A_HUMAN | -0.87 | 2.69 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | -1.54 | 2.49 | 2.00 | n/a | No Hit |
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