rs4790961 chr17:65100961 C>T
- Sequence
cttgtctcccactggtgctctggc[C/T]gtgaatccatccaggcgccaggag
- ASB in cell types
- MS-1 (Small cell lung carcinoma) GM12892 (female B-cells lymphoblastoid cell line) gastroesophageal sphincter GM18505 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.28 | 0.31 | 1.04 | n/a | No Hit | |||
| STAG1_HUMAN | 2.40 | 0.34 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2