rs4792204 chr17:11953173 T>G

Sequence
gcttcaacatatgaatttgccagg[T/G]acatggcccagtccgtagaggggg
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
ATF2_HUMAN CREB1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF2_HUMAN -2.60 2.70 1.003.2·10-3 1.00 n/a No Hit
CREB1_HUMAN 0.35 2.12 1.000.04 1.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg

Download