rs4792994 chr17:43456911 C>T
- Sequence
ttacaatctgtcaccagcacagga[C/T]gatttaatcatcctaatgaggctg
- ASB in cell types
- HepG2 (hepatoblastoma) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- NFIL3_HUMAN ETS1_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIL3_HUMAN | n/a | 2.73 | 3.00 | 4.01 | Concordant | |||
| ETS1_HUMAN | -0.39 | 1.78 | 1.00 | 2.34 | Concordant | |||
| RAD21_HUMAN | -0.73 | 2.01 | 2.50 | n/a | n/a |
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Motif analysis
