rs4793678 chr17:50944400 G>T
- Sequence
cctccaccttcttgcccctggtgg[G/T]agatgggagtggggcttggaggtg
- ASB in cell types
- breast tumor thoracic aorta 22RV1 (prostate carcinoma) bipolar neuron
- ASB for transcription factors
- CTCF_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.37 | 1.75 | 1.10 | 1.43 | Weak Concordant | |||
| ANDR_HUMAN | 2.77 | -1.22 | 2.00 | n/a | No Hit |
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Motif analysis
