rs4794139 chr17:50397715 G>A

Sequence
ttattgctggcagtgccacgaggc[G/A]aaagggcacggactgggcgccaga
ASB in cell types
K562 (myelogenous leukemia) foreskin keratinocyte SK-BR-3 (breast adenocarcinoma) HepG2 (hepatoblastoma)
ASB for transcription factors
AP2C_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
AP2C_HUMAN n/a 3.06 1.000.02 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease
GTEx eQTL Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Skin_Sun_Exposed_Lower_leg Thyroid

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