rs4794243 chr17:51371771 T>C
- Sequence
gtggtgctcttgggaggctcatca[T/C]tggttgggtcctcccccattgcct
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM12890 (Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line) FT282 (normal human fallopian tube tissue)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.15 | 1.37 | 1.52 | n/a | No Hit | |||
| STAG1_HUMAN | 0.72 | 2.10 | 1.80 | n/a | n/a | |||
| SMC3_HUMAN | 0.28 | 1.07 | 2.86 | n/a | n/a |
Items per page:
1 – 3 of 3