rs4795800 chr17:33520674 T>C
- Sequence
cttacccacggacagggcccctct[T/C]ggggctatgaagggtggaggagca
- ASB in cell types
- foreskin keratinocyte GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.46 | 1.08 | 1.26 | -1.15 | Weak Discordant |
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Motif analysis
