rs4795938 chr17:34581045 T>C
- Sequence
ggccaagtcgtcgtcgactgttgc[T/C]ctctcggacccctcccgcccccgc
- ASB for transcription factors
- SCRT2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SCRT2_HUMAN | 2.16 | -1.95 | 1.00 | -0.79 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Esophagus_Muscularis, Heart_Atrial_Appendage, Minor_Salivary_Gland, Skin_Not_Sun_Exposed_Suprapubic