rs4797123 chr18:3789727 C>T

Sequence
taaggaaatgtcaaaaaagatgag[C/T]ttgcagaaatatccctcggctgtg
ASB for transcription factors
MAFK_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MAFK_HUMAN 2.54 -2.58 0.011.00 1.00 3.34 Discordant
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Motif analysis

MAFK_HUMAN Discordant
MAFK_HUMAN pic

Genetic associations

GRASP aortic valve calcium,  ldl cholesterol change with statins,  total cholesterol,  total cholesterol change with statins
GTEx eQTL Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Frontal_Cortex_BA9

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