rs4797362 chr18:9335058 C>G
- Sequence
ccgggagaagcctgggcccggctg[C/G]gcggaggacaaagtgggggtgctg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- ZFX_HUMAN NRF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | -0.28 | 1.53 | 1.00 | n/a | No Hit | |||
| NRF1_HUMAN | 1.60 | -0.95 | 1.00 | -3.90 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Testis