rs4797363 chr18:9335075 G>C
- Sequence
ccggctgcgcggaggacaaagtgg[G/C]ggtgctgggcgcgggcgcacaggc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- RFOX2_HUMAN STAG1_HUMAN NRF1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFOX2_HUMAN | 2.07 | -2.27 | 1.25 | n/a | n/a | |||
| STAG1_HUMAN | 0.99 | 0.33 | 1.05 | n/a | n/a | |||
| NRF1_HUMAN | 1.71 | -0.93 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Testis