rs4797701 chr18:12702611 G>A
- Sequence
cagatgccctaactgcgcggcccc[G/A]gccgggccagggagcgttaggagc
- ASB in cell types
- 22RV1 (prostate carcinoma) BEAS-2B (bronchial epithelium) MOLM-13(acute monocytic leukemia(AML), Homo sapiens)
- ASB for transcription factors
- ANDR_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.98 | -5.49 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 0.22 | 1.05 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg