rs4798889 chr18:9913933 C>A
- Sequence
cagcagccccgcgccgcgctaggc[C/A]ggcctggagggcgggacaagcgct
- ASB in cell types
- K562 (myelogenous leukemia) HL-60 (acute myeloid leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- RFX1_HUMAN HDAC1_HUMAN INT11_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | -2.15 | 2.15 | 1.00 | n/a | No Hit | |||
| HDAC1_HUMAN | -0.31 | 1.98 | 1.17 | n/a | n/a | |||
| INT11_HUMAN | -0.36 | 1.28 | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | 1.66 | -0.58 | 1.67 | n/a | No Hit |
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