rs4800777 chr18:26959306 A>C
- Sequence
aaagatggaaacaatcgacactga[A/C]gaccactagagggaggagtgatgg
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM10847 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.13 | 3.28 | 1.17 | 1.63 | Weak Concordant |
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Motif analysis
