rs4800935 chr18:54679997 A>G

Sequence
aaagtgtgttttacttacaaagat[A/G]agcaaatatgaaactttcaaaaaa
ASB in cell types
foreskin keratinocyte GM19238 (female B-cells lymphoblastoid cell lines)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte 2.89 -3.77 6.0·10-31.00 2.50
GM19238 (female B-cells lymphoblastoid cell lines) -2.04 1.23 1.000.02 1.33
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels ldl cholesterol
GTEx eQTL Adipose_Visceral_Omentum Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Mucosa Lung Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid

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