rs4802085 chr19:40715608 G>C
- Sequence
tgccttgcttgccaactgtttccc[G/C]ctcacgccttcaactctctcgtgt
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) esophagus muscularis mucosa sigmoid colon
- ASB for transcription factors
- EP300_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 2.46 | 0.30 | 1.44 | n/a | n/a | |||
| TF65_HUMAN | 1.22 | -0.23 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP fasting insulin, hdl cholesterol, infant head circumference, mitral annular calcium, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Stomach, Thyroid, Vagina, Whole_Blood