rs4802262 chr19:45646628 T>C

Sequence
gctctgttctaggtgctgaagttt[T/C]cggaatgaccaagtgaacctgttt
ASB in cell types
K562 (myelogenous leukemia) CRC107 (colorectal cancer metastatic stem cells)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.15 0.92 1.001.5·10-7 1.99
CRC107 (colorectal cancer metastatic stem cells) 2.22 0.16 0.031.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP asthma college completion endometriosis height response to anti-tnf treatment for rheumatoid arthritis (change in disease activity score (das28)) total cholesterol
GTEx eQTL Esophagus_Gastroesophageal_Junction Heart_Left_Ventricle Nerve_Tibial Testis

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