rs4802456 chr19:48265498 G>A
- Sequence
gccggccaaaacccaccaaaacca[G/A]gatggcgacgagagtgacctctgg
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line) GM02255 (Lymphoblastoid Cell Lines) neural progenitors
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.38 | -0.16 | 1.21 | n/a | No Hit |
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