rs4802550 chr19:49085163 T>G
- Sequence
catgcgcgaaagatccgggaagtg[T/G]gatcggaaaggggcggagcatcag
- ASB in cell types
- HEK293 (embryonic kidney) 22RV1 (prostate carcinoma) HCASMC (Human coronary artery smooth muscle cells) transverse colon
- ASB for transcription factors
- ANDR_HUMAN TCF21_HUMAN ELF1_HUMAN GCR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.99 | -5.21 | 2.00 | n/a | No Hit | |||
| TCF21_HUMAN | 2.27 | -2.27 | 1.00 | n/a | No Hit | |||
| ELF1_HUMAN | -4.41 | 1.37 | 2.50 | n/a | No Hit | |||
| GCR_HUMAN | 0.84 | 1.30 | 1.03 | n/a | No Hit | |||
| BRD4_HUMAN | 1.44 | 0.53 | 1.25 | n/a | n/a |
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