rs4803205 chr19:39125853 G>A
- Sequence
gtggtggcggtgcaagagagctga[G/A]ggaggcgcgagggcgcggagttcc
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN TF65_HUMAN STAT1_HUMAN ZBT8A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.72 | -4.55 | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | 2.58 | 0.17 | 1.80 | n/a | No Hit | |||
| STAT1_HUMAN | 2.52 | 0.31 | 1.50 | n/a | No Hit | |||
| ZBT8A_HUMAN | -1.32 | 2.40 | 3.00 | n/a | n/a | |||
| NELFA_HUMAN | -3.96 | 1.37 | 2.00 | n/a | n/a |
Items per page:
1 – 5 of 5
Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Spleen, Testis, Thyroid, Whole_Blood