rs4803520 chr19:41996221 A>G
- Sequence
cacatcttttaacccagatgcctc[A/G]cccccagacgccccctccccaact
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- RFX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFX1_HUMAN | 0.24 | 2.29 | 2.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), cognitive response of healthy volunteers to topiramate treatment as measure by the digit symbol cognitive test, height, sporadic creutzfeldt-jakob disease
GTEx eQTL Adipose_Visceral_Omentum, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Cells_Cultured_fibroblasts, Liver, Nerve_Tibial, Testis, Whole_Blood