rs4806174 chr19:35534044 G>C
- Sequence
ttggaaccttgccggggacgtgct[G/C]accacttcgcaggcgagagctcag
- ASB in cell types
- breast tumor LNCaP (prostate carcinoma) LHSAR (prostate epithelial cells) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.04 | -0.09 | 1.57 | -3.54 | Concordant | |||
| ESR1_HUMAN | 2.94 | -0.38 | 2.00 | -3.11 | Concordant |
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Motif analysis
