rs4806827 chr19:2094593 C>T
- Sequence
ccagccttcagcagctcctcagct[C/T]tgcgtcccagcgcctcttccgtaa
- ASB in cell types
- MDM(monocyte derived macrophages) monocyte-derived macrophages from peripheral blood HL-60 (acute myeloid leukemia) monocytes from periferal blood
- ASB for transcription factors
- SPI1_HUMAN INT13_HUMAN SRBP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.73 | -0.13 | 2.38 | n/a | No Hit | |||
| INT13_HUMAN | 2.19 | -1.11 | 1.00 | n/a | n/a | |||
| SRBP2_HUMAN | 1.82 | -0.52 | 4.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Skin_Sun_Exposed_Lower_leg