rs4808305 chr19:14690145 T>C
- Sequence
acggtgggagtgtctccggctggc[T/C]tgcaggtgtggcccggcccctcgg
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) HEK293 (embryonic kidney) neural cell
- ASB for transcription factors
- NRF1_HUMAN TP53B_HUMAN SP130_HUMAN NELFA_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 1.34 | -0.08 | 1.83 | n/a | No Hit | |||
| TP53B_HUMAN | 1.92 | -0.82 | 1.00 | n/a | n/a | |||
| SP130_HUMAN | 2.28 | -1.94 | 1.00 | n/a | n/a | |||
| NELFA_HUMAN | 1.93 | -3.59 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood