rs4808419 chr19:15990108 G>A
- Sequence
cttcagtaccagagggtggacagc[G/A]tccatgcatctaggttctcaggag
- ASB in cell types
- HCT-116 (colon carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | 1.89 | -0.34 | 1.42 | -0.17 | Weak Concordant |
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Motif analysis
