rs4808791 chr19:18380395 G>A
- Sequence
ggtggacggactggcctgacctcc[G/A]gcccctgtgctctgtttacttcca
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- GATA3_HUMAN TFE3_HUMAN NR2C1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | n/a | 3.18 | 2.00 | n/a | No Hit | |||
| TFE3_HUMAN | 2.24 | -1.91 | 1.00 | n/a | No Hit | |||
| NR2C1_HUMAN | 1.34 | -3.73 | 2.00 | -2.07 | Concordant |
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Motif analysis
