rs4809546 chr20:62704784 C>T
- Sequence
atctgccaacagccccagagatgc[C/T]tggagcgcagccagcgtgaggctg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) keratinocytes
- ASB for transcription factors
- NFIB_HUMAN SNAI2_HUMAN CTBP1_HUMAN SIN3A_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIB_HUMAN | n/a | 2.35 | 2.50 | 0.81 | Weak Concordant | |||
| SNAI2_HUMAN | 3.01 | n/a | 3.00 | n/a | No Hit | |||
| CTBP1_HUMAN | n/a | 2.13 | 2.00 | n/a | n/a | |||
| SIN3A_HUMAN | 0.43 | 1.74 | 1.67 | n/a | n/a |
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Motif analysis
