rs4809808 chr20:50686957 A>G
- Sequence
cgtgcttgctggcttaggccctta[A/G]aactggaaagggcccacctggctc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF-7 C4-12 (invasive breast ductal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ZFX_HUMAN YBOX1_HUMAN DDX20_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | n/a | 3.28 | 4.00 | n/a | No Hit | |||
| ZFX_HUMAN | n/a | 3.87 | 5.00 | n/a | No Hit | |||
| YBOX1_HUMAN | n/a | 3.32 | 4.00 | n/a | No Hit | |||
| DDX20_HUMAN | n/a | 3.33 | 4.00 | n/a | n/a | |||
| ESR1_HUMAN | n/a | 2.92 | 5.00 | n/a | No Hit |
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