rs4810362 chr20:36950277 A>G

Sequence
cacttgttgctagtcaaagaaaat[A/G]aagtaataatccatcccagcagtg
ASB in cell types
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 0.17 1.55 1.000.01 3.00 -0.35 Weak Discordant
Items per page:
1 – 1 of 1

Motif analysis

STAT1_HUMAN Weak Discordant
STAT1_HUMAN pic

Genetic associations

EMBL-EBI height
GRASP comorbid depressive syndrome and alcohol dependence,  height,  ldl cholesterol,  microalbuminuria,  salmonella-induced pyroptosis
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Ovary,  Thyroid,  Whole_Blood

Download