rs4810690 chr20:47786524 G>A
- Sequence
gccgcgacccgcagctcaatcgca[G/A]ggcaaaccgagctgcctgtgcgcg
- ASB in cell types
- foreskin keratinocyte HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line) breast tumor
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN NFXL1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.70 | 0.29 | 1.75 | n/a | No Hit | |||
| STAG1_HUMAN | 0.77 | -0.65 | 1.17 | n/a | n/a | |||
| NFXL1_HUMAN | 2.67 | n/a | 2.00 | n/a | n/a |
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