rs4810691 chr20:47786576 C>G
- Sequence
gagaactccccgagaaattaactt[C/G]ggctcaagtgaaaatagcagctgt
- ASB in cell types
- HEK293 (embryonic kidney) pancreas GM12878 (female B-cells lymphoblastoid cell line) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD21_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.01 | 0.38 | 1.30 | n/a | No Hit | |||
| STAG1_HUMAN | 0.75 | 0.95 | 1.41 | n/a | n/a | |||
| RAD21_HUMAN | 0.99 | 0.03 | 1.34 | n/a | n/a | |||
| TCF21_HUMAN | 1.71 | -1.39 | 3.00 | n/a | No Hit | |||
| SKI_HUMAN | 2.27 | -2.27 | 1.00 | n/a | n/a |
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