rs4811464 chr20:53786422 C>T
- Sequence
ggaactgttaagagtccttctttt[C/T]tcttttccttctcctacttttatt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- HDAC2_HUMAN FOXA1_HUMAN SMRC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC2_HUMAN | n/a | 4.25 | 2.00 | n/a | n/a | |||
| FOXA1_HUMAN | 0.39 | 1.76 | 1.53 | n/a | No Hit | |||
| SMRC1_HUMAN | 1.34 | 0.49 | 1.00 | n/a | n/a |
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