rs4845888 chr1:11910946 C>G
- Sequence
aggtcccaaaacctcaaaagtagg[C/G]aagctgacagtgcagccttcaatc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ZN407_HUMAN IKZF1_HUMAN NR2C1_HUMAN TIF1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN407_HUMAN | 3.14 | -3.48 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.16 | 1.87 | 1.25 | n/a | n/a | |||
| NR2C1_HUMAN | -0.70 | 2.12 | 1.00 | n/a | No Hit | |||
| TIF1B_HUMAN | 1.94 | n/a | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Testis, Whole_Blood