rs4881477 chr10:5549121 A>G
- Sequence
gggcgtaaactctgagggcgatgg[A/G]ggcatcagggtacagagatgaagt
- ASB in cell types
- HAEC (human aortic endothelial cells) K562 (myelogenous leukemia)
- ASB for transcription factors
- HTF4_HUMAN YBOX1_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | 3.03 | -5.54 | 2.00 | n/a | No Hit | |||
| YBOX1_HUMAN | n/a | 2.67 | 1.00 | -1.82 | Weak Discordant | |||
| JUN_HUMAN | 2.37 | 0.23 | 1.50 | 1.78 | Weak Discordant |
Items per page:
1 – 3 of 3
Motif analysis
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg