rs4919779 chr12:85844699 T>C
- Sequence
acttgtccacatacctcattcttc[T/C]tggaggcaggacaagaactcagga
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZN680_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN680_HUMAN | 3.25 | n/a | 2.00 | -1.50 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Muscularis, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid