rs4935673 chr10:50421465 A>T
- Sequence
gctcccactggtggcaggaaataa[A/T]actgaagagacccaagtcctgcct
- ASB in cell types
- K562 (myelogenous leukemia) CD14+ monocytes
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN C2D1A_HUMAN ZN407_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.00 | 0.55 | 1.31 | n/a | No Hit | |||
| STAT1_HUMAN | 1.92 | -4.43 | 2.00 | -0.28 | Weak Concordant | |||
| C2D1A_HUMAN | -2.44 | 2.82 | 1.00 | n/a | n/a | |||
| ZN407_HUMAN | -1.53 | 2.30 | 1.00 | n/a | No Hit | |||
| HDAC1_HUMAN | -0.51 | 2.15 | 1.61 | n/a | n/a |
Items per page:
1 – 5 of 7
Motif analysis
