rs4971226 chr1:203287672 T>G
- Sequence
tttaggttagtgccctggctgtga[T/G]gaagtggaacttgttacccaagga
- ASB in cell types
- MDM(monocyte derived macrophages) macrophages form periferal blood monocyte-derived macrophages from peripheral blood monocyte-derived dendritic cells
- ASB for transcription factors
- SPI1_HUMAN SPIB_HUMAN MEF2B_HUMAN FOXP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.17 | 2.11 | 2.17 | 7.79 | Concordant | |||
| SPIB_HUMAN | -1.22 | 2.37 | 1.33 | 5.56 | Concordant | |||
| MEF2B_HUMAN | -0.19 | 1.74 | 1.40 | n/a | No Hit | |||
| FOXP1_HUMAN | n/a | 2.24 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 0.00 | 1.78 | 1.17 | n/a | No Hit |
Items per page:
1 – 5 of 7
Motif analysis
