rs5007570 chr1:204412110 G>T
- Sequence
cgcatgcgcagtcgtttctgtgtg[G/T]tctcctaggagaccgccccaacag
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) HAEC (human aortic endothelial cells) CD14+ monocytes
- ASB for transcription factors
- NR2C1_HUMAN ZN639_HUMAN NRF1_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NR2C1_HUMAN | -1.47 | 1.81 | 2.33 | n/a | No Hit | |||
| ZN639_HUMAN | n/a | 2.39 | 3.00 | n/a | n/a | |||
| NRF1_HUMAN | 0.77 | 2.00 | 3.20 | n/a | No Hit | |||
| STAT1_HUMAN | n/a | 2.81 | 3.00 | n/a | No Hit | |||
| FOXJ2_HUMAN | -2.21 | 3.00 | 2.00 | n/a | No Hit |
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