ADASTRA v6.1.0
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rs5046
chr1:230714652
G
>
A
Sequence
caaaggcctctaatagacactggg[G/A]aaaacacacaagcaagtgaaaagt
ASB in cell types
HepG2 (hepatoblastoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HepG2 (hepatoblastoma)
0.47
0.72
0.96
4.2·10
-4
1.11
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
coronary artery disease (cad)
,
fasting insulin
,
hypertension
,
systolic blood pressure (sbp)
,
triglycerides
GTEx eQTL
Muscle_Skeletal
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale