rs518471 chr18:618124 T>C
- Sequence
ctgaagagtacgtttggtttctta[T/C]ctgtgctgtgtcctgtttgcatgt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ZEB2_HUMAN MTA1_HUMAN MTA3_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZEB2_HUMAN | 4.11 | -3.78 | 1.00 | 4.08 | Discordant | |||
| MTA1_HUMAN | 4.17 | -4.05 | 1.00 | n/a | n/a | |||
| MTA3_HUMAN | 4.24 | -4.23 | 1.00 | n/a | n/a | |||
| MNT_HUMAN | 3.98 | -3.97 | 1.00 | n/a | No Hit | |||
| MYBB_HUMAN | 4.15 | -4.50 | 1.00 | n/a | No Hit |
Items per page:
1 – 5 of 34
Motif analysis
