rs539546121 chr15:89411741 G>T
- Sequence
cgctgtggggcttggtggttcaga[G/T]ccacacctgacaccctcacgtccc
- ASB in cell types
- neural progenitors GM12878 (female B-cells lymphoblastoid cell line) GM02255 (Lymphoblastoid Cell Lines) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.21 | 0.69 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.99 | 0.48 | 1.29 | n/a | No Hit |
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