rs540841486 chr18:13801156 C>G
- Sequence
gtggagcgctagcgcccccgggcc[C/G]gcaggtgtcgggacgggaatgctt
- ASB in cell types
- MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.50 | 1.35 | 1.46 | 1.18 | Weak Concordant | |||
| STAG1_HUMAN | -1.65 | 1.65 | 1.00 | n/a | n/a |
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Motif analysis
