rs541484228 chr17:36196750 C>T

Sequence
ggactgactactctttgctgcctg[C/T]gtccttctgatgtctgaagccatc
ASB in cell types
MM1.S (plasma cell myeloma) GM02630 (Fanconi anemi) monocytes from periferal blood
ASB for transcription factors
MBD4_HUMAN SRBP2_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MBD4_HUMAN 2.04 0.16 2.7·10-31.00 2.00 n/a n/a
SRBP2_HUMAN 2.11 n/a 8.4·10-31.00 2.50 n/a No Hit
BRD4_HUMAN 2.30 1.09 9.2·10-31.00 2.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia

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