rs544468094 chr1:156660256 G>T
- Sequence
gtcctgaggaggcgggaggggaag[G/T]ggggtggctggctatgtggggggg
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) GSC23 (Glioblastoma) tibial nerve OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- CTCF_HUMAN SPI1_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.98 | 1.32 | 1.19 | n/a | No Hit | |||
| SPI1_HUMAN | -0.50 | 2.46 | 1.00 | 6.48 | Concordant | |||
| SMCA4_HUMAN | 0.38 | 1.60 | 1.00 | n/a | n/a |
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Motif analysis
