rs544998458 chr1:16905190 T>C
- Sequence
tatggagctgtggcggggcggaag[T/C]tcacatgtgtggtatgtagagcac
- ASB in cell types
- 22RV1 (prostate carcinoma) CUTLL1 (T-cell lymphoblastic lymphoma 1) Th1-cells
- ASB for transcription factors
- FOXA1_HUMAN UBP7_HUMAN MAF_HUMAN HXB13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.50 | -2.08 | 1.50 | n/a | No Hit | |||
| UBP7_HUMAN | 2.29 | n/a | 2.00 | n/a | n/a | |||
| MAF_HUMAN | 1.77 | n/a | 2.75 | n/a | No Hit | |||
| HXB13_HUMAN | 2.27 | -2.27 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4