rs546447196 chr6:32968821 T>G
- Sequence
cgtggctgggggaaaggcgggggg[T/G]gggggggaagcgggcacgtgaccc
- ASB in cell types
- HepG2 (hepatoblastoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- XBP1_HUMAN USF2_HUMAN MED26_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| XBP1_HUMAN | 2.26 | n/a | 2.00 | n/a | No Hit | |||
| USF2_HUMAN | 2.15 | n/a | 2.00 | n/a | No Hit | |||
| MED26_HUMAN | 2.04 | -1.84 | 1.00 | n/a | n/a |
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