rs546563676 chr5:170638889 A>C
- Sequence
attaattccagctatgaccagcag[A/C]gggcagcagcagcctggggaagac
- ASB in cell types
- HPF (pulmonary fibroblasts isolated from lung tissue)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.66 | -4.10 | 1.33 | -4.23 | Concordant |
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Motif analysis
