rs547633748 chr16:89241094 C>A

Sequence
ggaagggaggagagcgagggactt[C/A]cggggggaagggaggagagcgagg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ZBT40_HUMAN PKNX1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZBT40_HUMAN 1.00 n/a 1.6·10-81.00 3.00 n/a No Hit
PKNX1_HUMAN 2.30 n/a 5.2·10-31.00 2.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Esophagus_Mucosa,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Whole_Blood

Download